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  • Hoffman Arildsen posted an update 3 months, 2 weeks ago

    Further, the existence of double-pole bright-dark solitons in the MCNLS equations with focusing, defocusing, and mixed (focusing-defocusing) nonlinearities is analyzed by constructing explicit determinant form solutions, where the double-pole bright solitons exhibit elastic and energy-exchanging collisions while the double-pole dark solitons undergo mere elastic collision. The double-pole bright-dark solitons possess much richer localized coherent patterns than their counterpart double-pole bright-bright solitons. For particular choices of parameters, we demonstrate that the solitons would degenerate into the background, resulting in a lower number of solitons. Another important observation is the formation of doubly localized rogue waves with extreme amplitude, in the case of double-pole bright-dark four-solitons. Our results should stimulate interest in such special multipole localized structures and are expected to have ramifications in nonlinear optics.Development in multicellular organisms is marked by a high degree of spatial organization of the cells attaining distinct fates in the embryo. Recent experiments showing that suppression of intercellular interactions can alter the spatial patterns arising during development suggest that cell fates cannot be determined by the exclusive regulation of differential gene expression by morphogen gradients (the conventional view encapsulated in the French flag model). Using a mathematical model that describes the receptor-ligand interaction between cells in close physical proximity, we show that such intercellular signaling can regulate the process of selective gene expression within each cell, allowing information from the cellular neighborhood to influence the process by which the thresholds of morphogen concentration that dictate cell fates adaptively emerge. Selleckchem AGK2 This results in local modulations of the positional cues provided by the global field set up by the morphogen, allowing interaction-mediated self-organized pattern formation to complement boundary-organized mechanisms in the context of development.We simulate the two-dimensional XY model in the flow representation by a worm-type algorithm, up to linear system size L=4096, and study the geometric properties of the flow configurations. As the coupling strength K increases, we observe that the system undergoes a percolation transition K_perc from a disordered phase consisting of small clusters into an ordered phase containing a giant percolating cluster. Namely, in the low-temperature phase, there exhibits a long-ranged order regarding the flow connectivity, in contrast to the quasi-long-range order associated with spin properties. Near K_perc, the scaling behavior of geometric observables is well described by the standard finite-size scaling ansatz for a second-order phase transition. The estimated percolation threshold K_perc=1.1053(4) is close to but obviously smaller than the Berezinskii-Kosterlitz-Thouless (BKT) transition point K_BKT=1.1193(10), which is determined from the magnetic susceptibility and the superfluid density. Various interesting questions arise from these unconventional observations, and their solutions would shed light on a variety of classical and quantum systems of BKT phase transitions.Newtonian turbulence is characterized by interscale transport of energy from the forcing scales to the dissipation scales. In elastoinertial turbulence, this interscale energy flux is weakened. Here, we explain this phenomenon by numerically showing that elastoinertial energy is predominantly dissipated through polymer chain relaxation. As opposed to Newtonian dissipation, chain relaxation is neither restricted to small nor to large scales but instead it is effective on all the scales. Chain relaxation does not therefore require interscale transport of elastoinertial energy from the forcing scales to the dissipation scales.Various feedback mechanisms regulate the expression of different genes to ensure the required protein levels inside a cell. In this paper, we develop a kinetic model for one such mechanism that autoregulates RF2 protein synthesis in E. coli through programmed frameshifting. The model finds that the programmed frameshifting autoregulates RF2 protein synthesis by two independent mechanisms. First, it increases the rate of RF2 synthesis from each mRNA transcript at low RF2 concentration. Second, programmed frameshifting can dramatically increase the lifetime of RF2 transcripts when RF2 protein levels are lower than a threshold. This sharp increase in mRNA lifetime is caused by a first-order phase transition from a low to a high ribosome density on an RF2 transcript. The high ribosome density prevents the transcript’s degradation by shielding it from nucleases, which increases its average lifetime and hence RF2 protein levels. Our study identifies this quality control mechanism that regulates the cellular protein levels by breaking the hierarchy of processes involved in gene expression.We consider closed quantum systems which are driven such that only negligible heating occurs. If driving only affects small parts of the system, it may nonetheless be strong. Our analysis aims at clarifying under which conditions the Jarzynski relation (JR) holds in such setups, if the initial states are microcanonical or even energy eigenstates. We find that the validity of the JR for the microcanonical initial state hinges on an exponential density of states and on stiffness. The latter indicates an independence of the probability density functions (PDFs) of work of the energy of the respective microcanonical initial state. The validity of the JR for initial energy eigenstates is found to additionally require smoothness. The latter indicates an independence of the work PDFs of the specific energy eigenstates within a microcanonical energy shell. As the validity of the JR for pure initial energy eigenstates has no analog in classical systems, we consider it a genuine quantum phenomenon.We study the diffusive transport of Markovian random walks on arbitrary networks with stochastic resetting to multiple nodes. We deduce analytical expressions for the stationary occupation probability and for the mean and global first passage times. This general approach allows us to characterize the effect of resetting on the capacity of random walk strategies to reach a particular target or to explore the network. Our formalism holds for ergodic random walks and can be implemented from the spectral properties of the random walk without resetting, providing a tool to analyze the efficiency of search strategies with resetting to multiple nodes. We apply the methods developed here to the dynamics with two reset nodes and derive analytical results for normal random walks and Lévy flights on rings. We also explore the effect of resetting to multiple nodes on a comb graph, Lévy flights that visit specific locations in a continuous space, and the Google random walk strategy on regular networks.

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